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  1. COmanage Framework Migration
  2. CFM-358

transmogrify fails for types because sequence reset happens out of order

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    Description

      Transmogrification of some Registry 4.3.1 data is failing after the types table has been processed and the 'postTable' hook is evaluated and calls insertPronounTypes() because at that point the primary key sequence types_id_seq is still set to value 1:

      biocommons_registry_dev=> select count(*) from types;
      		 
       count 
      		 
      -------
      		 
         226
      		 
      (1 row)biocommons_registry_dev=> select * from types_id_seq;
      		 
       last_value | log_cnt | is_called 
      		 
      ------------+---------+-----------
      		 
                1 |      32 | t
      		 
      (1 row)

      When insertPronounTypes() attempts to insert rows it finds

      <error>2023-12-04 04:58:11 error: [PDOException] SQLSTATE[23505]: Unique violation: 7 ERROR:  duplicate key value violates unique constraint "types_pkey"
      		 
      DETAIL:  Key (id)=(1) already exists. in /srv/comanage-registry/app/vendor/cakephp/cakephp/src/Database/Statement/StatementDecorator.php on line 180
      		 
      Stack Trace:
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/Database/Statement/StatementDecorator.php:180
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/Database/Connection.php:360
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/Core/Retry/CommandRetry.php:70
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/Database/Connection.php:363
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/Database/Query.php:255
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/ORM/Table.php:2077
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/ORM/Table.php:1970
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/ORM/Table.php:1869
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/ORM/Table.php:1556
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/Database/Connection.php:709
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/ORM/Table.php:1557
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/ORM/Table.php:1870
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/ORM/Table.php:2249
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/Database/Connection.php:709
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/ORM/Table.php:2255
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/ORM/Table.php:2204
      		 
      - /srv/comanage-registry/app/src/Model/Table/TypesTable.php:198
      		 
      - /srv/comanage-registry/app/src/Command/TransmogrifyCommand.php:927
      		 
      - /srv/comanage-registry/app/src/Command/TransmogrifyCommand.php:711
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/Console/BaseCommand.php:189
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/Console/CommandRunner.php:334
      		 
      - /srv/comanage-registry/app/vendor/cakephp/cakephp/src/Console/CommandRunner.php:172
      		 
      - /srv/comanage-registry/app/bin/cake.php:12
      		 
      </error>

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          is subtask of

          Sub-task - The sub-task of the issue CFM-29 Transmogrify Command

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              benn.oshrin@at.internet2.edu Benn Oshrin (internet2.edu)
              scott.koranda@at.internet2.edu Scott Koranda (uwm.edu/illinois.edu)
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